Basic Statistics
Measure | Value |
---|---|
Filename | dataset_2_Old_Mus_musculus_Bisulfite-Seq_2_val_2.fq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 89543564 |
Total Bases | 7.8 Gbp |
Sequences flagged as poor quality | 0 |
Sequence length | 20-100 |
%GC | 30 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
CGGCATTCCTGCTGAACCGCTCTTCCG | 857802 | 0.9579716974410355 | Illumina Paired End Adapter 2 (100% over 27bp) |
CGGCATTCCTGCTGAACCGCTCTTCCGA | 150384 | 0.16794506861486996 | Illumina Paired End Adapter 2 (100% over 28bp) |
CGGCATTCCTGCTGAACCGC | 129186 | 0.14427167540483424 | No Hit |
CGGCATTCCTNCTGAACCGCTCTTCCG | 111177 | 0.12415967718238242 | Illumina Paired End Adapter 2 (96% over 27bp) |
TCGGCATTCCTGCTGAACCGCTCTTCCGA | 100852 | 0.11262897688548561 | Illumina Paired End Adapter 2 (100% over 29bp) |
CGGCATTCCTGCTGAACCGCT | 95027 | 0.10612376340079561 | Illumina Paired End Adapter 2 (100% over 21bp) |